Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Gm27516-201ENSMUST00000184237 98 ntBASIC11.31□□□□□ -0.6
Nkx2-2P42586 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.31□□□□□ -0.6
Nkx2-2P42586 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Gm21769-201ENSMUST00000211922 111 ntBASIC11.31□□□□□ -0.6
Nkx2-2P42586 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.31□□□□□ -0.6
Nkx2-2P42586 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.3□□□□□ -0.6
Nkx2-2P42586 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Gm14726-201ENSMUST00000120623 896 ntBASIC11.3□□□□□ -0.6
Nkx2-2P42586 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Gm2991-201ENSMUST00000173338 480 ntBASIC11.3□□□□□ -0.6
Nkx2-2P42586 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Mir8109-201ENSMUST00000184375 117 ntBASIC11.3□□□□□ -0.6
Nkx2-2P42586 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Gm6334-201ENSMUST00000207083 228 ntBASIC11.3□□□□□ -0.6
Nkx2-2P42586 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Gm9899-201ENSMUST00000065519 555 ntBASIC11.3□□□□□ -0.6
Nkx2-2P42586 Gm9996-201ENSMUST00000070359 913 ntBASIC11.3□□□□□ -0.6
Nkx2-2P42586 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.3□□□□□ -0.6
Nkx2-2P42586 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nkx2-2P42586 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.29□□□□□ -0.6
Nkx2-2P42586 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.29□□□□□ -0.6
Nkx2-2P42586 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gm18711-201ENSMUST00000199341 750 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms