Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm12247-201ENSMUST00000117585 670 ntBASIC18.07■□□□□ 0.48
Chd1P40201 Gm13827-201ENSMUST00000148801 372 ntBASIC18.07■□□□□ 0.48
Chd1P40201 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chd1P40201 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC18.07■□□□□ 0.48
Chd1P40201 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chd1P40201 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chd1P40201 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chd1P40201 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chd1P40201 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Chd1P40201 Gm43167-201ENSMUST00000202001 1606 ntBASIC18.06■□□□□ 0.48
Chd1P40201 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC18.06■□□□□ 0.48
Chd1P40201 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Gm17221-201ENSMUST00000163909 481 ntBASIC18.06■□□□□ 0.48
Chd1P40201 Gm17073-201ENSMUST00000168069 556 ntBASIC18.06■□□□□ 0.48
Chd1P40201 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Gm37851-201ENSMUST00000193871 889 ntBASIC18.06■□□□□ 0.48
Chd1P40201 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 AC154589.2-201ENSMUST00000228847 251 ntBASIC18.06■□□□□ 0.48
Chd1P40201 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Gm38089-201ENSMUST00000193585 1514 ntBASIC18.06■□□□□ 0.48
Chd1P40201 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC18.06■□□□□ 0.48
Chd1P40201 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.06■□□□□ 0.48
Chd1P40201 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Chd1P40201 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC18.06■□□□□ 0.48
Chd1P40201 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.06■□□□□ 0.48
Chd1P40201 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC18.06■□□□□ 0.48
Chd1P40201 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Gm37207-201ENSMUST00000194284 296 ntBASIC18.06■□□□□ 0.48
Chd1P40201 Gm8234-201ENSMUST00000198523 1107 ntBASIC18.06■□□□□ 0.48
Chd1P40201 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 AC134869.4-202ENSMUST00000224350 837 ntBASIC18.06■□□□□ 0.48
Chd1P40201 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Chd1P40201 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 AC022682.1-201ENSMUST00000224624 2023 ntBASIC18.06■□□□□ 0.48
Chd1P40201 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC18.06■□□□□ 0.48
Chd1P40201 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1P40201 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1P40201 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1P40201 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1P40201 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1P40201 Gm13192-201ENSMUST00000101199 208 ntBASIC18.05■□□□□ 0.48
Chd1P40201 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Chd1P40201 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Chd1P40201 Gm10443-201ENSMUST00000119024 210 ntBASIC18.05■□□□□ 0.48
Chd1P40201 Gm20568-201ENSMUST00000197129 208 ntBASIC18.05■□□□□ 0.48
Chd1P40201 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC18.05■□□□□ 0.48
Chd1P40201 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
Chd1P40201 Zkscan3-207ENSMUST00000223831 2101 ntBASIC18.05■□□□□ 0.48
Chd1P40201 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1P40201 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1P40201 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1P40201 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.05■□□□□ 0.48
Chd1P40201 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1P40201 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1P40201 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1P40201 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC18.05■□□□□ 0.48
Chd1P40201 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Gm23604-201ENSMUST00000104311 132 ntBASIC18.04■□□□□ 0.48
Chd1P40201 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC18.04■□□□□ 0.48
Chd1P40201 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms