Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Cdh4P39038 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cdh4P39038 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdh4P39038 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.85□□□□□ -0.51
Cdh4P39038 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Gm25214-201ENSMUST00000104573 129 ntBASIC11.85□□□□□ -0.51
Cdh4P39038 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Cdh4P39038 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdh4P39038 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Gm14381-201ENSMUST00000122105 414 ntBASIC11.85□□□□□ -0.51
Cdh4P39038 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.85□□□□□ -0.51
Cdh4P39038 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Gm18304-201ENSMUST00000189162 546 ntBASIC11.85□□□□□ -0.51
Cdh4P39038 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.85□□□□□ -0.51
Cdh4P39038 Gm31256-201ENSMUST00000194705 506 ntBASIC11.85□□□□□ -0.51
Cdh4P39038 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.85□□□□□ -0.51
Cdh4P39038 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdh4P39038 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.85□□□□□ -0.51
Cdh4P39038 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.85□□□□□ -0.51
Cdh4P39038 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cdh4P39038 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cdh4P39038 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdh4P39038 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdh4P39038 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh4P39038 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdh4P39038 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cdh4P39038 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Cdh4P39038 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cdh4P39038 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdh4P39038 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdh4P39038 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.84□□□□□ -0.51
Cdh4P39038 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdh4P39038 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.84□□□□□ -0.51
Cdh4P39038 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh4P39038 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cdh4P39038 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cdh4P39038 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.83□□□□□ -0.51
Cdh4P39038 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdh4P39038 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.83□□□□□ -0.52
Cdh4P39038 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Gm24255-201ENSMUST00000104481 128 ntBASIC11.83□□□□□ -0.52
Cdh4P39038 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdh4P39038 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Gm13350-201ENSMUST00000120519 479 ntBASIC11.83□□□□□ -0.52
Cdh4P39038 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdh4P39038 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Cdh4P39038 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.83□□□□□ -0.52
Cdh4P39038 Mir6420-201ENSMUST00000185032 102 ntBASIC11.83□□□□□ -0.52
Cdh4P39038 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.83□□□□□ -0.52
Cdh4P39038 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms