Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.3□□□□□ -0.44
LdlrP35951 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Gm24231-201ENSMUST00000104315 133 ntBASIC12.3□□□□□ -0.44
LdlrP35951 Snord83b-201ENSMUST00000104546 94 ntBASIC12.3□□□□□ -0.44
LdlrP35951 Gm11793-201ENSMUST00000120433 981 ntBASIC12.3□□□□□ -0.44
LdlrP35951 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.3□□□□□ -0.44
LdlrP35951 Gm29199-201ENSMUST00000187766 775 ntBASIC12.3□□□□□ -0.44
LdlrP35951 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.3□□□□□ -0.44
LdlrP35951 Gm37042-201ENSMUST00000193816 581 ntBASIC12.3□□□□□ -0.44
LdlrP35951 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.3□□□□□ -0.44
LdlrP35951 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.3□□□□□ -0.44
LdlrP35951 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LdlrP35951 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
LdlrP35951 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.3□□□□□ -0.44
LdlrP35951 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LdlrP35951 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LdlrP35951 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LdlrP35951 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LdlrP35951 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LdlrP35951 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
LdlrP35951 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LdlrP35951 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.29□□□□□ -0.44
LdlrP35951 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LdlrP35951 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.29□□□□□ -0.44
LdlrP35951 Gm16479-201ENSMUST00000121706 932 ntBASIC12.29□□□□□ -0.44
LdlrP35951 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.29□□□□□ -0.44
LdlrP35951 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.29□□□□□ -0.44
LdlrP35951 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.29□□□□□ -0.44
LdlrP35951 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Gm43133-201ENSMUST00000197472 463 ntBASIC12.29□□□□□ -0.44
LdlrP35951 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.29□□□□□ -0.44
LdlrP35951 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.29□□□□□ -0.44
LdlrP35951 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
LdlrP35951 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.29□□□□□ -0.44
LdlrP35951 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms