Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Slc6a11P31650 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.74□□□□□ -0.53
Slc6a11P31650 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.74□□□□□ -0.53
Slc6a11P31650 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Gm14381-201ENSMUST00000122105 414 ntBASIC11.74□□□□□ -0.53
Slc6a11P31650 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.74□□□□□ -0.53
Slc6a11P31650 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.74□□□□□ -0.53
Slc6a11P31650 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.74□□□□□ -0.53
Slc6a11P31650 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Gm8227-201ENSMUST00000223306 571 ntBASIC11.74□□□□□ -0.53
Slc6a11P31650 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.74□□□□□ -0.53
Slc6a11P31650 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.74□□□□□ -0.53
Slc6a11P31650 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.74□□□□□ -0.53
Slc6a11P31650 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a11P31650 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.74□□□□□ -0.53
Slc6a11P31650 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Slc6a11P31650 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Slc6a11P31650 Gm16479-201ENSMUST00000121706 932 ntBASIC11.73□□□□□ -0.53
Slc6a11P31650 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.73□□□□□ -0.53
Slc6a11P31650 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.73□□□□□ -0.53
Slc6a11P31650 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.73□□□□□ -0.53
Slc6a11P31650 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.73□□□□□ -0.53
Slc6a11P31650 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.73□□□□□ -0.53
Slc6a11P31650 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.73□□□□□ -0.53
Slc6a11P31650 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.73□□□□□ -0.53
Slc6a11P31650 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.73□□□□□ -0.53
Slc6a11P31650 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Slc6a11P31650 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.73□□□□□ -0.53
Slc6a11P31650 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms