Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.02□□□□□ -0.49
Hoxc11P31313 Gm45186-201ENSMUST00000206874 478 ntBASIC12.02□□□□□ -0.49
Hoxc11P31313 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.02□□□□□ -0.49
Hoxc11P31313 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.02□□□□□ -0.49
Hoxc11P31313 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hoxc11P31313 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.02□□□□□ -0.49
Hoxc11P31313 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.02□□□□□ -0.49
Hoxc11P31313 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc11P31313 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc11P31313 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.02□□□□□ -0.49
Hoxc11P31313 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.02□□□□□ -0.49
Hoxc11P31313 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc11P31313 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Hoxc11P31313 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hoxc11P31313 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc11P31313 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Hoxc11P31313 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc11P31313 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.01□□□□□ -0.49
Hoxc11P31313 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Map1b-203ENSMUST00000223725 2669 ntBASIC12.01□□□□□ -0.49
Hoxc11P31313 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Gm8712-201ENSMUST00000221090 701 ntBASIC12.01□□□□□ -0.49
Hoxc11P31313 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hoxc11P31313 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hoxc11P31313 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.01□□□□□ -0.49
Hoxc11P31313 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc11P31313 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hoxc11P31313 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hoxc11P31313 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12□□□□□ -0.49
Hoxc11P31313 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12□□□□□ -0.49
Hoxc11P31313 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Mir7070-201ENSMUST00000183657 86 ntBASIC12□□□□□ -0.49
Hoxc11P31313 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12□□□□□ -0.49
Hoxc11P31313 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hoxc11P31313 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hoxc11P31313 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hoxc11P31313 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc11P31313 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hoxc11P31313 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms