Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Gm26095-201ENSMUST00000179270 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm22171-201ENSMUST00000179283 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm23936-201ENSMUST00000179354 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm22619-201ENSMUST00000179516 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm25255-201ENSMUST00000179579 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm24755-201ENSMUST00000179691 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm26506-201ENSMUST00000179692 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm25086-201ENSMUST00000179931 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm23243-201ENSMUST00000180047 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm24659-201ENSMUST00000180212 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm24169-201ENSMUST00000180244 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm23689-201ENSMUST00000180354 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm27359-201ENSMUST00000184153 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm27785-201ENSMUST00000184268 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm27466-201ENSMUST00000184396 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm27703-201ENSMUST00000184836 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.37□□□□□ -0.59
Nedd8P29595 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Nedd8P29595 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nedd8P29595 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nedd8P29595 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.36□□□□□ -0.59
Nedd8P29595 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Nedd8P29595 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Nedd8P29595 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nedd8P29595 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nedd8P29595 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nedd8P29595 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Nedd8P29595 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.36□□□□□ -0.59
Nedd8P29595 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.36□□□□□ -0.59
Nedd8P29595 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.36□□□□□ -0.59
Nedd8P29595 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Gm15376-201ENSMUST00000122258 783 ntBASIC11.36□□□□□ -0.59
Nedd8P29595 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.36□□□□□ -0.59
Nedd8P29595 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.36□□□□□ -0.59
Nedd8P29595 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.36□□□□□ -0.59
Nedd8P29595 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nedd8P29595 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nedd8P29595 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nedd8P29595 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nedd8P29595 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nedd8P29595 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.35□□□□□ -0.59
Nedd8P29595 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.35□□□□□ -0.59
Nedd8P29595 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Nedd8P29595 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms