Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.39□□□□□ -0.43
RxrbP28704 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.39□□□□□ -0.43
RxrbP28704 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.39□□□□□ -0.43
RxrbP28704 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RxrbP28704 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Snord83b-201ENSMUST00000104546 94 ntBASIC12.39□□□□□ -0.43
RxrbP28704 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.39□□□□□ -0.43
RxrbP28704 Gm11637-201ENSMUST00000120601 592 ntBASIC12.39□□□□□ -0.43
RxrbP28704 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.39□□□□□ -0.43
RxrbP28704 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.39□□□□□ -0.43
RxrbP28704 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.39□□□□□ -0.43
RxrbP28704 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.39□□□□□ -0.43
RxrbP28704 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.39□□□□□ -0.43
RxrbP28704 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.39□□□□□ -0.43
RxrbP28704 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
RxrbP28704 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.39□□□□□ -0.43
RxrbP28704 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
RxrbP28704 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.39□□□□□ -0.43
RxrbP28704 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.39□□□□□ -0.43
RxrbP28704 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.39□□□□□ -0.43
RxrbP28704 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RxrbP28704 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.38□□□□□ -0.43
RxrbP28704 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.38□□□□□ -0.43
RxrbP28704 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.38□□□□□ -0.43
RxrbP28704 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.38□□□□□ -0.43
RxrbP28704 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RxrbP28704 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.38□□□□□ -0.43
RxrbP28704 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.38□□□□□ -0.43
RxrbP28704 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RxrbP28704 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.38□□□□□ -0.43
RxrbP28704 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Gm4034-201ENSMUST00000187674 480 ntBASIC12.38□□□□□ -0.43
RxrbP28704 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.38□□□□□ -0.43
RxrbP28704 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.38□□□□□ -0.43
RxrbP28704 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.38□□□□□ -0.43
RxrbP28704 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.38□□□□□ -0.43
RxrbP28704 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.38□□□□□ -0.43
RxrbP28704 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.38□□□□□ -0.43
RxrbP28704 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.38□□□□□ -0.43
RxrbP28704 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RxrbP28704 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RxrbP28704 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RxrbP28704 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.38□□□□□ -0.43
RxrbP28704 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms