Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col2a1P28481 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Map1b-203ENSMUST00000223725 2669 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col2a1P28481 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.84□□□□□ -0.19
Col2a1P28481 Gm22920-201ENSMUST00000102175 109 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col2a1P28481 Gm15573-201ENSMUST00000119487 540 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.84□□□□□ -0.19
Col2a1P28481 Gm24844-201ENSMUST00000158679 127 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.84□□□□□ -0.19
Col2a1P28481 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Col2a1P28481 Gm23045-201ENSMUST00000175041 96 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.84□□□□□ -0.19
Col2a1P28481 Gm28937-201ENSMUST00000185413 695 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm29400-201ENSMUST00000187208 695 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm28662-201ENSMUST00000188446 695 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm28251-201ENSMUST00000188835 695 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.84□□□□□ -0.19
Col2a1P28481 Gm37318-201ENSMUST00000194325 695 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm38017-201ENSMUST00000194768 695 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm37287-201ENSMUST00000195449 695 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm37793-201ENSMUST00000195548 695 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Gm6450-201ENSMUST00000200896 574 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.84□□□□□ -0.19
Col2a1P28481 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
Col2a1P28481 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.84□□□□□ -0.19
Col2a1P28481 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col2a1P28481 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Col2a1P28481 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.84□□□□□ -0.19
Col2a1P28481 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col2a1P28481 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.83□□□□□ -0.19
Col2a1P28481 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col2a1P28481 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col2a1P28481 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col2a1P28481 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.83□□□□□ -0.19
Col2a1P28481 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col2a1P28481 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Col2a1P28481 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm14441-201ENSMUST00000121960 540 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm9136-201ENSMUST00000193368 454 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm44980-201ENSMUST00000205826 314 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 Gm45398-201ENSMUST00000210561 165 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm7940-201ENSMUST00000218195 769 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Col2a1P28481 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.83□□□□□ -0.2
Col2a1P28481 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.83□□□□□ -0.2
Col2a1P28481 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col2a1P28481 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col2a1P28481 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Col2a1P28481 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms