Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pde6aP27664 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pde6aP27664 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pde6aP27664 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Pde6aP27664 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pde6aP27664 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Gm6963-201ENSMUST00000147879 379 ntBASIC14.3□□□□□ -0.12
Pde6aP27664 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.3□□□□□ -0.12
Pde6aP27664 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.3□□□□□ -0.12
Pde6aP27664 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Gm5070-201ENSMUST00000177599 862 ntBASIC14.3□□□□□ -0.12
Pde6aP27664 Gm27320-201ENSMUST00000184892 109 ntBASIC14.3□□□□□ -0.12
Pde6aP27664 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pde6aP27664 Gm38317-201ENSMUST00000195564 343 ntBASIC14.3□□□□□ -0.12
Pde6aP27664 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.3□□□□□ -0.12
Pde6aP27664 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.3□□□□□ -0.12
Pde6aP27664 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pde6aP27664 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pde6aP27664 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.3□□□□□ -0.12
Pde6aP27664 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.3□□□□□ -0.12
Pde6aP27664 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.3□□□□□ -0.12
Pde6aP27664 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6aP27664 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pde6aP27664 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pde6aP27664 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pde6aP27664 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.29□□□□□ -0.12
Pde6aP27664 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.29□□□□□ -0.12
Pde6aP27664 Rprl1-201ENSMUST00000158050 327 ntBASIC14.29□□□□□ -0.12
Pde6aP27664 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.29□□□□□ -0.12
Pde6aP27664 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Gm6082-201ENSMUST00000215204 454 ntBASIC14.29□□□□□ -0.12
Pde6aP27664 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.29□□□□□ -0.12
Pde6aP27664 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.29□□□□□ -0.12
Pde6aP27664 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Pde6aP27664 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.29□□□□□ -0.12
Pde6aP27664 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.29□□□□□ -0.12
Pde6aP27664 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pde6aP27664 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6aP27664 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Pde6aP27664 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pde6aP27664 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.28□□□□□ -0.12
Pde6aP27664 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.28□□□□□ -0.12
Pde6aP27664 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pde6aP27664 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.28□□□□□ -0.12
Pde6aP27664 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Pde6aP27664 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.28□□□□□ -0.12
Pde6aP27664 Gm27390-201ENSMUST00000184516 176 ntBASIC14.28□□□□□ -0.12
Pde6aP27664 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.28□□□□□ -0.12
Pde6aP27664 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.28□□□□□ -0.12
Pde6aP27664 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.28□□□□□ -0.12
Pde6aP27664 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.28□□□□□ -0.12
Pde6aP27664 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms