Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afxP27661 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
H2afxP27661 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afxP27661 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
H2afxP27661 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
H2afxP27661 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H2afxP27661 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
H2afxP27661 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H2afxP27661 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.86□□□□□ -0.35
H2afxP27661 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
H2afxP27661 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.86□□□□□ -0.35
H2afxP27661 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.86□□□□□ -0.35
H2afxP27661 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.86□□□□□ -0.35
H2afxP27661 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.86□□□□□ -0.35
H2afxP27661 Gm10253-201ENSMUST00000194270 940 ntBASIC12.86□□□□□ -0.35
H2afxP27661 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
H2afxP27661 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.86□□□□□ -0.35
H2afxP27661 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.86□□□□□ -0.35
H2afxP27661 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afxP27661 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
H2afxP27661 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
H2afxP27661 Gm4875-201ENSMUST00000118257 786 ntBASIC12.85□□□□□ -0.35
H2afxP27661 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
H2afxP27661 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.85□□□□□ -0.35
H2afxP27661 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
H2afxP27661 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.85□□□□□ -0.35
H2afxP27661 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
H2afxP27661 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
H2afxP27661 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afxP27661 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.85□□□□□ -0.35
H2afxP27661 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
H2afxP27661 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
H2afxP27661 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.84□□□□□ -0.35
H2afxP27661 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
H2afxP27661 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
H2afxP27661 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afxP27661 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
H2afxP27661 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.84□□□□□ -0.35
H2afxP27661 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.84□□□□□ -0.35
H2afxP27661 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.84□□□□□ -0.35
H2afxP27661 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.84□□□□□ -0.35
H2afxP27661 Gm5279-201ENSMUST00000199575 745 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms