Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Gm12390-201ENSMUST00000117897 397 ntBASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Gm6007-201ENSMUST00000208170 823 ntBASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Gm22058-201ENSMUST00000083393 310 ntBASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tnfrsf1aP25118 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.33□□□□□ -0.76
Tnfrsf1aP25118 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.33□□□□□ -0.76
Tnfrsf1aP25118 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.33□□□□□ -0.76
Tnfrsf1aP25118 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfrsf1aP25118 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfrsf1aP25118 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tnfrsf1aP25118 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms