Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
BdnfP21237 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.88□□□□□ -0.51
BdnfP21237 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.88□□□□□ -0.51
BdnfP21237 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.88□□□□□ -0.51
BdnfP21237 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.88□□□□□ -0.51
BdnfP21237 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
BdnfP21237 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.88□□□□□ -0.51
BdnfP21237 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.88□□□□□ -0.51
BdnfP21237 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.88□□□□□ -0.51
BdnfP21237 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.88□□□□□ -0.51
BdnfP21237 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.88□□□□□ -0.51
BdnfP21237 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.88□□□□□ -0.51
BdnfP21237 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.88□□□□□ -0.51
BdnfP21237 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
BdnfP21237 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
BdnfP21237 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
BdnfP21237 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.87□□□□□ -0.51
BdnfP21237 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.87□□□□□ -0.51
BdnfP21237 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
BdnfP21237 Gm15806-201ENSMUST00000120696 955 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.87□□□□□ -0.51
BdnfP21237 Gm2231-201ENSMUST00000125661 612 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Gm23363-201ENSMUST00000175024 79 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Gm22121-201ENSMUST00000175148 54 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Gm9002-201ENSMUST00000178437 499 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Gm24196-201ENSMUST00000179161 110 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.87□□□□□ -0.51
BdnfP21237 Gm37042-201ENSMUST00000193816 581 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.87□□□□□ -0.51
BdnfP21237 Gm17794-201ENSMUST00000220252 955 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
BdnfP21237 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
BdnfP21237 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
BdnfP21237 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
BdnfP21237 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
BdnfP21237 Gm45132-201ENSMUST00000207234 2542 ntBASIC11.87□□□□□ -0.51
BdnfP21237 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms