Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm7774-201ENSMUST00000200064 533 ntBASIC12.51□□□□□ -0.41
VimP20152 Gm5312-201ENSMUST00000203728 547 ntBASIC12.51□□□□□ -0.41
VimP20152 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.51□□□□□ -0.41
VimP20152 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.51□□□□□ -0.41
VimP20152 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.51□□□□□ -0.41
VimP20152 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VimP20152 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.51□□□□□ -0.41
VimP20152 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.51□□□□□ -0.41
VimP20152 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
VimP20152 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
VimP20152 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VimP20152 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.5□□□□□ -0.41
VimP20152 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VimP20152 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
VimP20152 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VimP20152 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
VimP20152 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VimP20152 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VimP20152 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.49□□□□□ -0.41
VimP20152 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.49□□□□□ -0.41
VimP20152 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VimP20152 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.49□□□□□ -0.41
VimP20152 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.49□□□□□ -0.41
VimP20152 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VimP20152 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.49□□□□□ -0.41
VimP20152 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.49□□□□□ -0.41
VimP20152 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Gm11524-201ENSMUST00000119349 807 ntBASIC12.49□□□□□ -0.41
VimP20152 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.49□□□□□ -0.41
VimP20152 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.49□□□□□ -0.41
VimP20152 Gm19078-201ENSMUST00000206311 727 ntBASIC12.49□□□□□ -0.41
VimP20152 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.49□□□□□ -0.41
VimP20152 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Mzt1-203ENSMUST00000227948 952 ntBASIC12.49□□□□□ -0.41
VimP20152 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VimP20152 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VimP20152 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VimP20152 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 381.1 ms