Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Msx1P13297 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.91□□□□□ -0.5
Msx1P13297 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.91□□□□□ -0.5
Msx1P13297 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.91□□□□□ -0.5
Msx1P13297 Gm22588-201ENSMUST00000157510 140 ntBASIC11.91□□□□□ -0.5
Msx1P13297 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Msx1P13297 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.91□□□□□ -0.5
Msx1P13297 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Msx1P13297 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.91□□□□□ -0.5
Msx1P13297 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.91□□□□□ -0.5
Msx1P13297 Gm37469-201ENSMUST00000193728 890 ntBASIC11.91□□□□□ -0.5
Msx1P13297 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.91□□□□□ -0.5
Msx1P13297 Gm38317-201ENSMUST00000195564 343 ntBASIC11.91□□□□□ -0.5
Msx1P13297 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.91□□□□□ -0.5
Msx1P13297 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.91□□□□□ -0.5
Msx1P13297 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.91□□□□□ -0.5
Msx1P13297 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 AC118006.2-201ENSMUST00000224167 962 ntBASIC11.91□□□□□ -0.5
Msx1P13297 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Msx1P13297 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Msx1P13297 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Zfp865-202ENSMUST00000076791 1129 ntBASIC11.91□□□□□ -0.5
Msx1P13297 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.91□□□□□ -0.5
Msx1P13297 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.91□□□□□ -0.5
Msx1P13297 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.91□□□□□ -0.5
Msx1P13297 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Msx1P13297 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Msx1P13297 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.9□□□□□ -0.5
Msx1P13297 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.9□□□□□ -0.5
Msx1P13297 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Msx1P13297 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.9□□□□□ -0.5
Msx1P13297 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Msx1P13297 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Gm7857-201ENSMUST00000117957 358 ntBASIC11.9□□□□□ -0.5
Msx1P13297 Gm12217-201ENSMUST00000118858 696 ntBASIC11.9□□□□□ -0.5
Msx1P13297 Gm12601-201ENSMUST00000118994 846 ntBASIC11.9□□□□□ -0.5
Msx1P13297 Gm13813-201ENSMUST00000120998 787 ntBASIC11.9□□□□□ -0.5
Msx1P13297 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Msx1P13297 Mir6927-201ENSMUST00000184494 71 ntBASIC11.9□□□□□ -0.5
Msx1P13297 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC11.9□□□□□ -0.5
Msx1P13297 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Gm28438-201ENSMUST00000188299 345 ntBASIC11.9□□□□□ -0.5
Msx1P13297 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC11.9□□□□□ -0.5
Msx1P13297 Gm44967-201ENSMUST00000207047 631 ntBASIC11.9□□□□□ -0.5
Msx1P13297 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.9□□□□□ -0.5
Msx1P13297 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.9□□□□□ -0.5
Msx1P13297 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.9□□□□□ -0.5
Msx1P13297 AC154730.1-201ENSMUST00000227874 816 ntBASIC11.9□□□□□ -0.5
Msx1P13297 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Msx1P13297 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msx1P13297 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.9□□□□□ -0.5
Msx1P13297 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msx1P13297 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msx1P13297 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Msx1P13297 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msx1P13297 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msx1P13297 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.9□□□□□ -0.51
Msx1P13297 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msx1P13297 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx1P13297 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msx1P13297 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms