Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxc9P09633 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Hoxc9P09633 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Hoxc9P09633 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.92■□□□□ 0.14
Hoxc9P09633 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxc9P09633 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxc9P09633 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxc9P09633 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxc9P09633 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxc9P09633 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxc9P09633 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxc9P09633 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxc9P09633 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxc9P09633 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Hoxc9P09633 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Hoxc9P09633 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.91■□□□□ 0.14
Hoxc9P09633 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
Hoxc9P09633 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.91■□□□□ 0.14
Hoxc9P09633 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Hoxc9P09633 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.91■□□□□ 0.14
Hoxc9P09633 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC15.91■□□□□ 0.14
Hoxc9P09633 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.91■□□□□ 0.14
Hoxc9P09633 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.91■□□□□ 0.14
Hoxc9P09633 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Mir8115-201ENSMUST00000184992 119 ntBASIC15.91■□□□□ 0.14
Hoxc9P09633 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.91■□□□□ 0.14
Hoxc9P09633 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.91■□□□□ 0.14
Hoxc9P09633 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxc9P09633 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.91■□□□□ 0.14
Hoxc9P09633 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm14585-201ENSMUST00000120713 634 ntBASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm11660-201ENSMUST00000120955 412 ntBASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.9■□□□□ 0.14
Hoxc9P09633 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Hoxc9P09633 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxc9P09633 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.9■□□□□ 0.14
Hoxc9P09633 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.89■□□□□ 0.13
Hoxc9P09633 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Hoxc9P09633 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms