Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc8P09025 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm15207-201ENSMUST00000119259 442 ntBASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm15566-201ENSMUST00000121130 590 ntBASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm23045-201ENSMUST00000175041 96 ntBASIC13.07□□□□□ -0.32
Hoxc8P09025 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Mir7076-201ENSMUST00000183519 74 ntBASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm38117-201ENSMUST00000194653 939 ntBASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm17931-201ENSMUST00000208132 634 ntBASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.07□□□□□ -0.32
Hoxc8P09025 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.07□□□□□ -0.32
Hoxc8P09025 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.07□□□□□ -0.32
Hoxc8P09025 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Gm13916-201ENSMUST00000117368 628 ntBASIC13.06□□□□□ -0.32
Hoxc8P09025 Gm11949-201ENSMUST00000117640 372 ntBASIC13.06□□□□□ -0.32
Hoxc8P09025 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.06□□□□□ -0.32
Hoxc8P09025 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Gm21092-201ENSMUST00000178995 955 ntBASIC13.06□□□□□ -0.32
Hoxc8P09025 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Gm19287-201ENSMUST00000203190 358 ntBASIC13.06□□□□□ -0.32
Hoxc8P09025 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.06□□□□□ -0.32
Hoxc8P09025 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.06□□□□□ -0.32
Hoxc8P09025 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.06□□□□□ -0.32
Hoxc8P09025 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc8P09025 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hoxc8P09025 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms