Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Tuba1bP05213 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.55□□□□□ -0.56
Tuba1bP05213 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Tuba1bP05213 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tuba1bP05213 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tuba1bP05213 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Tuba1bP05213 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.54□□□□□ -0.56
Tuba1bP05213 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.54□□□□□ -0.56
Tuba1bP05213 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm8810-201ENSMUST00000172895 754 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.54□□□□□ -0.56
Tuba1bP05213 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm18187-201ENSMUST00000196476 984 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.54□□□□□ -0.56
Tuba1bP05213 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.54□□□□□ -0.56
Tuba1bP05213 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tuba1bP05213 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
Tuba1bP05213 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Gm14350-201ENSMUST00000116642 640 ntBASIC11.53□□□□□ -0.56
Tuba1bP05213 Gm5687-201ENSMUST00000118252 640 ntBASIC11.53□□□□□ -0.56
Tuba1bP05213 Gm11803-201ENSMUST00000119966 444 ntBASIC11.53□□□□□ -0.56
Tuba1bP05213 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.53□□□□□ -0.56
Tuba1bP05213 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.53□□□□□ -0.56
Tuba1bP05213 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.53□□□□□ -0.56
Tuba1bP05213 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tuba1bP05213 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms