Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
TcraP01849 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.03□□□□□ -0.96
TcraP01849 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
TcraP01849 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
TcraP01849 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
TcraP01849 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
TcraP01849 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
TcraP01849 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
TcraP01849 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.96
TcraP01849 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.02□□□□□ -0.96
TcraP01849 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
TcraP01849 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
TcraP01849 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
TcraP01849 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.02□□□□□ -0.97
TcraP01849 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.02□□□□□ -0.97
TcraP01849 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.02□□□□□ -0.97
TcraP01849 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.02□□□□□ -0.97
TcraP01849 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC9.02□□□□□ -0.97
TcraP01849 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
TcraP01849 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
TcraP01849 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
TcraP01849 Gm27989-201ENSMUST00000184721 107 ntBASIC9.02□□□□□ -0.97
TcraP01849 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.02□□□□□ -0.97
TcraP01849 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.02□□□□□ -0.97
TcraP01849 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.02□□□□□ -0.97
TcraP01849 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.02□□□□□ -0.97
TcraP01849 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
TcraP01849 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
TcraP01849 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.02□□□□□ -0.97
TcraP01849 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
TcraP01849 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.02□□□□□ -0.97
TcraP01849 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.02□□□□□ -0.97
TcraP01849 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
TcraP01849 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
TcraP01849 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
TcraP01849 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.02□□□□□ -0.97
TcraP01849 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.02□□□□□ -0.97
TcraP01849 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.01□□□□□ -0.97
TcraP01849 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
TcraP01849 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.01□□□□□ -0.97
TcraP01849 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
TcraP01849 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.01□□□□□ -0.97
TcraP01849 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
TcraP01849 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.01□□□□□ -0.97
TcraP01849 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC9.01□□□□□ -0.97
TcraP01849 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.01□□□□□ -0.97
TcraP01849 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TcraP01849 Gm15240-201ENSMUST00000118156 720 ntBASIC9.01□□□□□ -0.97
TcraP01849 Gm15920-201ENSMUST00000118998 402 ntBASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms