Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
P01788 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P01788 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P01788 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
P01788 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
P01788 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
P01788 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.74□□□□□ -0.85
P01788 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
P01788 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
P01788 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.74□□□□□ -0.85
P01788 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Gm45384-201ENSMUST00000210451 277 ntBASIC9.74□□□□□ -0.85
P01788 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC9.74□□□□□ -0.85
P01788 Gm19163-201ENSMUST00000223313 780 ntBASIC9.74□□□□□ -0.85
P01788 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.74□□□□□ -0.85
P01788 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
P01788 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
P01788 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
P01788 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
P01788 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.74□□□□□ -0.85
P01788 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P01788 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.73□□□□□ -0.85
P01788 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.73□□□□□ -0.85
P01788 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.73□□□□□ -0.85
P01788 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
P01788 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
P01788 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.73□□□□□ -0.85
P01788 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.73□□□□□ -0.85
P01788 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
P01788 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.73□□□□□ -0.85
P01788 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.73□□□□□ -0.85
P01788 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.73□□□□□ -0.85
P01788 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
P01788 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.73□□□□□ -0.85
P01788 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.73□□□□□ -0.85
P01788 Gm12384-201ENSMUST00000119228 919 ntBASIC9.73□□□□□ -0.85
P01788 Gm14928-201ENSMUST00000120198 477 ntBASIC9.73□□□□□ -0.85
P01788 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Rmrp-201ENSMUST00000157463 271 ntBASIC9.73□□□□□ -0.85
P01788 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
P01788 Gm5866-201ENSMUST00000177881 973 ntBASIC9.73□□□□□ -0.85
P01788 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.73□□□□□ -0.85
P01788 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Gm9908-201ENSMUST00000211534 448 ntBASIC9.73□□□□□ -0.85
P01788 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.73□□□□□ -0.85
P01788 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.73□□□□□ -0.85
P01788 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Gm6180-201ENSMUST00000065243 498 ntBASIC9.73□□□□□ -0.85
P01788 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Gm10012-201ENSMUST00000078252 192 ntBASIC9.73□□□□□ -0.85
P01788 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
P01788 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
P01788 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms