Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.86□□□□□ -0.51
Hcn1O88704 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hcn1O88704 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.86□□□□□ -0.51
Hcn1O88704 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.86□□□□□ -0.51
Hcn1O88704 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hcn1O88704 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.86□□□□□ -0.51
Hcn1O88704 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.86□□□□□ -0.51
Hcn1O88704 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.86□□□□□ -0.51
Hcn1O88704 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Gm3890-201ENSMUST00000182416 207 ntBASIC11.86□□□□□ -0.51
Hcn1O88704 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.86□□□□□ -0.51
Hcn1O88704 Gm6013-201ENSMUST00000212264 699 ntBASIC11.86□□□□□ -0.51
Hcn1O88704 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.86□□□□□ -0.51
Hcn1O88704 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.86□□□□□ -0.51
Hcn1O88704 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.86□□□□□ -0.51
Hcn1O88704 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hcn1O88704 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.86□□□□□ -0.51
Hcn1O88704 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.86□□□□□ -0.51
Hcn1O88704 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hcn1O88704 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.86□□□□□ -0.51
Hcn1O88704 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.86□□□□□ -0.51
Hcn1O88704 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.85□□□□□ -0.51
Hcn1O88704 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.85□□□□□ -0.51
Hcn1O88704 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Hcn1O88704 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Hcn1O88704 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.85□□□□□ -0.51
Hcn1O88704 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.85□□□□□ -0.51
Hcn1O88704 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.85□□□□□ -0.51
Hcn1O88704 Gm12291-201ENSMUST00000121627 311 ntBASIC11.85□□□□□ -0.51
Hcn1O88704 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.85□□□□□ -0.51
Hcn1O88704 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.85□□□□□ -0.51
Hcn1O88704 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.85□□□□□ -0.51
Hcn1O88704 Gm43118-201ENSMUST00000199149 775 ntBASIC11.85□□□□□ -0.51
Hcn1O88704 Gm18584-201ENSMUST00000203098 964 ntBASIC11.85□□□□□ -0.51
Hcn1O88704 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.85□□□□□ -0.51
Hcn1O88704 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.85□□□□□ -0.51
Hcn1O88704 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Hcn1O88704 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.85□□□□□ -0.51
Hcn1O88704 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hcn1O88704 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.85□□□□□ -0.51
Hcn1O88704 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hcn1O88704 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hcn1O88704 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hcn1O88704 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hcn1O88704 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.84□□□□□ -0.51
Hcn1O88704 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hcn1O88704 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hcn1O88704 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms