Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Gm15711-201ENSMUST00000118889 535 ntBASIC13.09□□□□□ -0.31
Psmc3O88685 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.09□□□□□ -0.31
Psmc3O88685 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.09□□□□□ -0.31
Psmc3O88685 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.09□□□□□ -0.31
Psmc3O88685 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.09□□□□□ -0.31
Psmc3O88685 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.09□□□□□ -0.31
Psmc3O88685 Gm9555-201ENSMUST00000200908 583 ntBASIC13.09□□□□□ -0.31
Psmc3O88685 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.09□□□□□ -0.31
Psmc3O88685 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Psmc3O88685 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.09□□□□□ -0.31
Psmc3O88685 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Psmc3O88685 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Psmc3O88685 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.09□□□□□ -0.31
Psmc3O88685 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Psmc3O88685 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Psmc3O88685 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Psmc3O88685 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.08□□□□□ -0.32
Psmc3O88685 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.08□□□□□ -0.32
Psmc3O88685 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 Gm9230-201ENSMUST00000188228 532 ntBASIC13.08□□□□□ -0.32
Psmc3O88685 Gm28071-201ENSMUST00000190355 478 ntBASIC13.08□□□□□ -0.32
Psmc3O88685 Gm42937-201ENSMUST00000197360 752 ntBASIC13.08□□□□□ -0.32
Psmc3O88685 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 AY036118-201ENSMUST00000200021 923 ntBASIC13.08□□□□□ -0.32
Psmc3O88685 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.08□□□□□ -0.32
Psmc3O88685 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.08□□□□□ -0.32
Psmc3O88685 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Psmc3O88685 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Psmc3O88685 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Psmc3O88685 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.08□□□□□ -0.32
Psmc3O88685 Rubie-203ENSMUST00000227803 2430 ntBASIC13.08□□□□□ -0.32
Psmc3O88685 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Psmc3O88685 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Psmc3O88685 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.07□□□□□ -0.32
Psmc3O88685 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Psmc3O88685 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Psmc3O88685 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Psmc3O88685 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Psmc3O88685 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Psmc3O88685 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.07□□□□□ -0.32
Psmc3O88685 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.07□□□□□ -0.32
Psmc3O88685 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Psmc3O88685 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Psmc3O88685 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.07□□□□□ -0.32
Psmc3O88685 Gm23949-201ENSMUST00000104027 127 ntBASIC13.07□□□□□ -0.32
Psmc3O88685 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Psmc3O88685 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Psmc3O88685 Rmrp-201ENSMUST00000157463 271 ntBASIC13.07□□□□□ -0.32
Psmc3O88685 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.07□□□□□ -0.32
Psmc3O88685 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.07□□□□□ -0.32
Psmc3O88685 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.07□□□□□ -0.32
Psmc3O88685 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Psmc3O88685 Gm7467-201ENSMUST00000185173 652 ntBASIC13.07□□□□□ -0.32
Psmc3O88685 Gm37835-201ENSMUST00000193305 361 ntBASIC13.07□□□□□ -0.32
Psmc3O88685 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.07□□□□□ -0.32
Psmc3O88685 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.07□□□□□ -0.32
Psmc3O88685 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.07□□□□□ -0.32
Psmc3O88685 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.07□□□□□ -0.32
Psmc3O88685 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Psmc3O88685 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms