Protein–RNA interactions for Protein: O35655

Ppef1, Serine/threonine-protein phosphatase with EF-hands 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppef1O35655 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ppef1O35655 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ppef1O35655 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ppef1O35655 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.36□□□□□ -0.11
Ppef1O35655 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ppef1O35655 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.36□□□□□ -0.11
Ppef1O35655 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Gm22661-201ENSMUST00000104192 132 ntBASIC14.36□□□□□ -0.11
Ppef1O35655 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ppef1O35655 Gm8019-201ENSMUST00000119317 587 ntBASIC14.36□□□□□ -0.11
Ppef1O35655 Gm11544-201ENSMUST00000120215 382 ntBASIC14.36□□□□□ -0.11
Ppef1O35655 Gm25554-201ENSMUST00000158075 113 ntBASIC14.36□□□□□ -0.11
Ppef1O35655 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC14.36□□□□□ -0.11
Ppef1O35655 Gm7815-201ENSMUST00000196104 832 ntBASIC14.36□□□□□ -0.11
Ppef1O35655 Gm8574-201ENSMUST00000203207 924 ntBASIC14.36□□□□□ -0.11
Ppef1O35655 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Ppef1O35655 AC154433.1-201ENSMUST00000224401 1183 ntBASIC14.36□□□□□ -0.11
Ppef1O35655 AC137871.1-201ENSMUST00000228278 475 ntBASIC14.36□□□□□ -0.11
Ppef1O35655 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.36□□□□□ -0.11
Ppef1O35655 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ppef1O35655 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ppef1O35655 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.35□□□□□ -0.11
Ppef1O35655 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ppef1O35655 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Gm15982-201ENSMUST00000121681 554 ntBASIC14.35□□□□□ -0.11
Ppef1O35655 Gm25492-201ENSMUST00000157383 129 ntBASIC14.35□□□□□ -0.11
Ppef1O35655 Gm26174-201ENSMUST00000158415 219 ntBASIC14.35□□□□□ -0.11
Ppef1O35655 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC14.35□□□□□ -0.11
Ppef1O35655 Gm27826-201ENSMUST00000175282 255 ntBASIC14.35□□□□□ -0.11
Ppef1O35655 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC14.35□□□□□ -0.11
Ppef1O35655 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.35□□□□□ -0.11
Ppef1O35655 CT571271.1-201ENSMUST00000227071 670 ntBASIC14.35□□□□□ -0.11
Ppef1O35655 Gm23105-201ENSMUST00000083719 134 ntBASIC14.35□□□□□ -0.11
Ppef1O35655 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ppef1O35655 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ppef1O35655 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ppef1O35655 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ppef1O35655 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ppef1O35655 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ppef1O35655 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ppef1O35655 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ppef1O35655 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.34□□□□□ -0.11
Ppef1O35655 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ppef1O35655 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.34□□□□□ -0.11
Ppef1O35655 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.34□□□□□ -0.11
Ppef1O35655 Gm12009-201ENSMUST00000121361 1100 ntBASIC14.34□□□□□ -0.11
Ppef1O35655 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.34□□□□□ -0.11
Ppef1O35655 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ppef1O35655 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms