Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Npc1O35604 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.07□□□□□ -0.48
Npc1O35604 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Gm13875-201ENSMUST00000120162 282 ntBASIC12.07□□□□□ -0.48
Npc1O35604 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.07□□□□□ -0.48
Npc1O35604 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Npc1O35604 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Npc1O35604 Gm27243-201ENSMUST00000183964 521 ntBASIC12.07□□□□□ -0.48
Npc1O35604 Gm3096-201ENSMUST00000185770 364 ntBASIC12.07□□□□□ -0.48
Npc1O35604 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.07□□□□□ -0.48
Npc1O35604 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.07□□□□□ -0.48
Npc1O35604 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.07□□□□□ -0.48
Npc1O35604 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Npc1O35604 Gm10076-201ENSMUST00000073238 384 ntBASIC12.07□□□□□ -0.48
Npc1O35604 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Npc1O35604 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Npc1O35604 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Npc1O35604 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Npc1O35604 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Npc1O35604 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.07□□□□□ -0.48
Npc1O35604 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.07□□□□□ -0.48
Npc1O35604 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.07□□□□□ -0.48
Npc1O35604 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.06□□□□□ -0.48
Npc1O35604 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Npc1O35604 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Npc1O35604 Gm25214-201ENSMUST00000104573 129 ntBASIC12.06□□□□□ -0.48
Npc1O35604 Mir877-201ENSMUST00000104738 85 ntBASIC12.06□□□□□ -0.48
Npc1O35604 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Npc1O35604 Gm14999-201ENSMUST00000121039 624 ntBASIC12.06□□□□□ -0.48
Npc1O35604 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.06□□□□□ -0.48
Npc1O35604 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.06□□□□□ -0.48
Npc1O35604 Gm44124-201ENSMUST00000204159 472 ntBASIC12.06□□□□□ -0.48
Npc1O35604 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.06□□□□□ -0.48
Npc1O35604 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Npc1O35604 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Npc1O35604 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Npc1O35604 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.06□□□□□ -0.48
Npc1O35604 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Npc1O35604 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Npc1O35604 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Npc1O35604 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.05□□□□□ -0.48
Npc1O35604 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.05□□□□□ -0.48
Npc1O35604 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Gm13315-201ENSMUST00000120376 991 ntBASIC12.05□□□□□ -0.48
Npc1O35604 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.05□□□□□ -0.48
Npc1O35604 Gm13570-201ENSMUST00000140763 309 ntBASIC12.05□□□□□ -0.48
Npc1O35604 Gm15276-201ENSMUST00000145953 498 ntBASIC12.05□□□□□ -0.48
Npc1O35604 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.05□□□□□ -0.48
Npc1O35604 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.05□□□□□ -0.48
Npc1O35604 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.05□□□□□ -0.48
Npc1O35604 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Gm4857-201ENSMUST00000192718 785 ntBASIC12.05□□□□□ -0.48
Npc1O35604 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.05□□□□□ -0.48
Npc1O35604 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.05□□□□□ -0.48
Npc1O35604 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms