Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Gm12203-201ENSMUST00000118235 598 ntBASIC12.15□□□□□ -0.46
Slc1a6O35544 Gm13369-201ENSMUST00000119442 987 ntBASIC12.15□□□□□ -0.46
Slc1a6O35544 Gm11803-201ENSMUST00000119966 444 ntBASIC12.15□□□□□ -0.46
Slc1a6O35544 Gm12209-201ENSMUST00000120089 596 ntBASIC12.15□□□□□ -0.46
Slc1a6O35544 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.15□□□□□ -0.46
Slc1a6O35544 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Gm10146-201ENSMUST00000072739 309 ntBASIC12.15□□□□□ -0.46
Slc1a6O35544 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Slc1a6O35544 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc1a6O35544 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Slc1a6O35544 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slc1a6O35544 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.14□□□□□ -0.47
Slc1a6O35544 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Gm7488-201ENSMUST00000117148 684 ntBASIC12.14□□□□□ -0.47
Slc1a6O35544 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Gm12363-201ENSMUST00000122250 668 ntBASIC12.14□□□□□ -0.47
Slc1a6O35544 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.14□□□□□ -0.47
Slc1a6O35544 Gm23119-201ENSMUST00000158610 140 ntBASIC12.14□□□□□ -0.47
Slc1a6O35544 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.14□□□□□ -0.47
Slc1a6O35544 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.14□□□□□ -0.47
Slc1a6O35544 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.14□□□□□ -0.47
Slc1a6O35544 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Slc1a6O35544 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.14□□□□□ -0.47
Slc1a6O35544 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.14□□□□□ -0.47
Slc1a6O35544 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.14□□□□□ -0.47
Slc1a6O35544 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.14□□□□□ -0.47
Slc1a6O35544 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Slc1a6O35544 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Slc1a6O35544 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Slc1a6O35544 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.14□□□□□ -0.47
Slc1a6O35544 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc1a6O35544 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.14□□□□□ -0.47
Slc1a6O35544 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Slc1a6O35544 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc1a6O35544 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.13□□□□□ -0.47
Slc1a6O35544 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc1a6O35544 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc1a6O35544 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc1a6O35544 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc1a6O35544 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.13□□□□□ -0.47
Slc1a6O35544 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Slc1a6O35544 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc1a6O35544 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.13□□□□□ -0.47
Slc1a6O35544 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Slc1a6O35544 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Slc1a6O35544 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc1a6O35544 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms