Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Dctn1O08788 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Dctn1O08788 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.22■□□□□ 0.03
Dctn1O08788 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.22■□□□□ 0.03
Dctn1O08788 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.22■□□□□ 0.03
Dctn1O08788 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Dctn1O08788 Gm4482-201ENSMUST00000200876 742 ntBASIC15.22■□□□□ 0.03
Dctn1O08788 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Dctn1O08788 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Dctn1O08788 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.22■□□□□ 0.03
Dctn1O08788 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dctn1O08788 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Dctn1O08788 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.21■□□□□ 0.03
Dctn1O08788 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Dctn1O08788 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Dctn1O08788 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Dctn1O08788 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.21■□□□□ 0.03
Dctn1O08788 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Dctn1O08788 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Dctn1O08788 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Dctn1O08788 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.21■□□□□ 0.03
Dctn1O08788 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Ginm1-202ENSMUST00000065124 300 ntBASIC15.21■□□□□ 0.03
Dctn1O08788 Gm10179-201ENSMUST00000086233 688 ntBASIC15.21■□□□□ 0.03
Dctn1O08788 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Dctn1O08788 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.21■□□□□ 0.03
Dctn1O08788 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dctn1O08788 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Dctn1O08788 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.21■□□□□ 0.03
Dctn1O08788 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Dctn1O08788 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Dctn1O08788 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Dctn1O08788 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Dctn1O08788 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Dctn1O08788 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Dctn1O08788 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Dctn1O08788 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Dctn1O08788 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Dctn1O08788 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.2■□□□□ 0.02
Dctn1O08788 Rprl1-201ENSMUST00000158050 327 ntBASIC15.2■□□□□ 0.02
Dctn1O08788 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.2■□□□□ 0.02
Dctn1O08788 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.2■□□□□ 0.02
Dctn1O08788 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.2■□□□□ 0.02
Dctn1O08788 Gm4607-201ENSMUST00000206649 577 ntBASIC15.2■□□□□ 0.02
Dctn1O08788 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.2■□□□□ 0.02
Dctn1O08788 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Dctn1O08788 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.2■□□□□ 0.02
Dctn1O08788 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.2■□□□□ 0.02
Dctn1O08788 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms