Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf11bO08712 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf11bO08712 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf11bO08712 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf11bO08712 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf11bO08712 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.54□□□□□ -0.4
Tnfrsf11bO08712 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf11bO08712 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Tnfrsf11bO08712 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Gm13342-201ENSMUST00000121055 207 ntBASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Gm16379-201ENSMUST00000161469 348 ntBASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Gm8762-201ENSMUST00000193486 339 ntBASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Gm6266-201ENSMUST00000203844 806 ntBASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Gm39404-201ENSMUST00000216350 313 ntBASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Gm10076-201ENSMUST00000073238 384 ntBASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf11bO08712 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf11bO08712 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf11bO08712 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf11bO08712 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.51□□□□□ -0.41
Tnfrsf11bO08712 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf11bO08712 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf11bO08712 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tnfrsf11bO08712 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf11bO08712 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf11bO08712 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Tnfrsf11bO08712 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf11bO08712 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Tnfrsf11bO08712 Gm11424-201ENSMUST00000121929 829 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 170.9 ms