Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Gm6916-202ENSMUST00000205523 195 ntBASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.67□□□□□ -0.38
Trim55G3X8Y1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Mir7023-201ENSMUST00000185093 64 ntBASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm20949-201ENSMUST00000206478 952 ntBASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm8227-201ENSMUST00000223306 571 ntBASIC12.67□□□□□ -0.38
Trim55G3X8Y1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim55G3X8Y1 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm22065-201ENSMUST00000103753 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm22066-201ENSMUST00000103761 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm24932-201ENSMUST00000103763 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm24115-201ENSMUST00000103799 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm22190-201ENSMUST00000103827 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm22191-201ENSMUST00000103831 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm24721-201ENSMUST00000103849 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm28018-201ENSMUST00000103869 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm26399-201ENSMUST00000103937 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms