Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.71■□□□□ 0.11
ScaperF8VQ70 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Gm5616-201ENSMUST00000165252 384 ntBASIC15.71■□□□□ 0.11
ScaperF8VQ70 Gm8741-201ENSMUST00000174736 384 ntBASIC15.71■□□□□ 0.11
ScaperF8VQ70 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.71■□□□□ 0.11
ScaperF8VQ70 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.71■□□□□ 0.11
ScaperF8VQ70 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.71■□□□□ 0.11
ScaperF8VQ70 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ScaperF8VQ70 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ScaperF8VQ70 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ScaperF8VQ70 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ScaperF8VQ70 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ScaperF8VQ70 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.71■□□□□ 0.1
ScaperF8VQ70 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ScaperF8VQ70 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.7■□□□□ 0.1
ScaperF8VQ70 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Gm28882-201ENSMUST00000185504 314 ntBASIC15.7■□□□□ 0.1
ScaperF8VQ70 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ScaperF8VQ70 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.69■□□□□ 0.1
ScaperF8VQ70 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Gm11941-201ENSMUST00000119904 610 ntBASIC15.69■□□□□ 0.1
ScaperF8VQ70 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.69■□□□□ 0.1
ScaperF8VQ70 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.69■□□□□ 0.1
ScaperF8VQ70 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
ScaperF8VQ70 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Gm37105-201ENSMUST00000192251 2085 ntBASIC15.69■□□□□ 0.1
ScaperF8VQ70 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ScaperF8VQ70 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ScaperF8VQ70 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms