Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Gm19287-201ENSMUST00000203190 358 ntBASIC14.28□□□□□ -0.12
Clrn2B2RVW2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn2B2RVW2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn2B2RVW2 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.27□□□□□ -0.12
Clrn2B2RVW2 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Gm45219-201ENSMUST00000205602 465 ntBASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Gm9132-201ENSMUST00000210182 832 ntBASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.27□□□□□ -0.13
Clrn2B2RVW2 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn2B2RVW2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn2B2RVW2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn2B2RVW2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms