Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 AC130823.1-201ENSMUST00000228929 1549 ntBASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Gm18968-201ENSMUST00000221319 862 ntBASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn7aB1AYL1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Gm12516-201ENSMUST00000120819 385 ntBASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Lgi3-203ENSMUST00000226548 1001 ntBASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.56■□□□□ 0.08
Scn7aB1AYL1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 CT009546.1-201ENSMUST00000222573 1120 ntBASIC15.55■□□□□ 0.08
Scn7aB1AYL1 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.55■□□□□ 0.08
Scn7aB1AYL1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn7aB1AYL1 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm13182-201ENSMUST00000122241 312 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm17798-201ENSMUST00000182282 1035 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm18561-201ENSMUST00000206027 804 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm6722-201ENSMUST00000221586 390 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Lect2-202ENSMUST00000225183 823 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Gm26013-201ENSMUST00000104404 119 ntBASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC15.54■□□□□ 0.08
Scn7aB1AYL1 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms