Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm25063-201ENSMUST00000104666 94 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm23105-201ENSMUST00000083719 134 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm15615-201ENSMUST00000118876 198 ntBASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm25201-201ENSMUST00000083093 170 ntBASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.44□□□□□ -0.42
Col4a6B1AVK5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col4a6B1AVK5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Gm11354-201ENSMUST00000121974 422 ntBASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Gm24398-201ENSMUST00000157870 109 ntBASIC12.43□□□□□ -0.42
Col4a6B1AVK5 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms