Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.88□□□□□ -0.35
Scn1aA2APX8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 AU022133-201ENSMUST00000200601 873 ntBASIC12.88□□□□□ -0.35
Scn1aA2APX8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.88□□□□□ -0.35
Scn1aA2APX8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1aA2APX8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.88□□□□□ -0.35
Scn1aA2APX8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.88□□□□□ -0.35
Scn1aA2APX8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.87□□□□□ -0.35
Scn1aA2APX8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.87□□□□□ -0.35
Scn1aA2APX8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.87□□□□□ -0.35
Scn1aA2APX8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm9555-201ENSMUST00000200908 583 ntBASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm18730-201ENSMUST00000218038 343 ntBASIC12.87□□□□□ -0.35
Scn1aA2APX8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.87□□□□□ -0.35
Scn1aA2APX8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn1aA2APX8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Gm23912-201ENSMUST00000104687 87 ntBASIC12.86□□□□□ -0.35
Scn1aA2APX8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.86□□□□□ -0.35
Scn1aA2APX8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.86□□□□□ -0.35
Scn1aA2APX8 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.86□□□□□ -0.35
Scn1aA2APX8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.86□□□□□ -0.35
Scn1aA2APX8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.86□□□□□ -0.35
Scn1aA2APX8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.86□□□□□ -0.35
Scn1aA2APX8 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.86□□□□□ -0.35
Scn1aA2APX8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.86□□□□□ -0.35
Scn1aA2APX8 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Gm18038-201ENSMUST00000197900 485 ntBASIC12.86□□□□□ -0.35
Scn1aA2APX8 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn1aA2APX8 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms