Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm28729A0A1B0GSW2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28729A0A1B0GSW2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28729A0A1B0GSW2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28729A0A1B0GSW2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm28729A0A1B0GSW2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Gm28729A0A1B0GSW2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Gm28729A0A1B0GSW2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm4482-201ENSMUST00000200876 742 ntBASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Gm28729A0A1B0GSW2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm28686-201ENSMUST00000187404 609 ntBASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm43184-201ENSMUST00000197247 542 ntBASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.01□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm43570-201ENSMUST00000199951 3688 ntBASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm26286-201ENSMUST00000104166 134 ntBASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Gm8285-201ENSMUST00000208293 759 ntBASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28729A0A1B0GSW2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms