Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.13□□□□□ -0.79
Trav18A0A075B656 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Gm13492-201ENSMUST00000119772 665 ntBASIC10.13□□□□□ -0.79
Trav18A0A075B656 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Gm12490-201ENSMUST00000120255 560 ntBASIC10.13□□□□□ -0.79
Trav18A0A075B656 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.13□□□□□ -0.79
Trav18A0A075B656 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Gm9022-201ENSMUST00000182482 992 ntBASIC10.13□□□□□ -0.79
Trav18A0A075B656 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Gm5035-201ENSMUST00000215581 927 ntBASIC10.13□□□□□ -0.79
Trav18A0A075B656 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.13□□□□□ -0.79
Trav18A0A075B656 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav18A0A075B656 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.12□□□□□ -0.79
Trav18A0A075B656 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.12□□□□□ -0.79
Trav18A0A075B656 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Gm11597-201ENSMUST00000121423 964 ntBASIC10.12□□□□□ -0.79
Trav18A0A075B656 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Gm27243-201ENSMUST00000183964 521 ntBASIC10.12□□□□□ -0.79
Trav18A0A075B656 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.12□□□□□ -0.79
Trav18A0A075B656 Gm7561-201ENSMUST00000211203 886 ntBASIC10.12□□□□□ -0.79
Trav18A0A075B656 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.12□□□□□ -0.79
Trav18A0A075B656 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms