Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm12585-201ENSMUST00000117307 290 ntBASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm6415-201ENSMUST00000118488 348 ntBASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm25911-201ENSMUST00000157621 56 ntBASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm9630-201ENSMUST00000178304 885 ntBASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm38140-201ENSMUST00000193617 2755 ntBASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Shd-206ENSMUST00000225145 998 ntBASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm5320-201ENSMUST00000207163 1519 ntBASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav8-1A0A075B641 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Trav8-1A0A075B641 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Trav8-1A0A075B641 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Trav8-1A0A075B641 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Trav8-1A0A075B641 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Gm44831-201ENSMUST00000208469 2989 ntBASIC8.83□□□□□ -1
Trav8-1A0A075B641 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC8.83□□□□□ -1
Trav8-1A0A075B641 Gm5779-201ENSMUST00000218467 910 ntBASIC8.83□□□□□ -1
Trav8-1A0A075B641 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms