Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
PdfS4R2K0 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.52□□□□□ -0.88
PdfS4R2K0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PdfS4R2K0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.52□□□□□ -0.89
PdfS4R2K0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Gm11524-201ENSMUST00000119349 807 ntBASIC9.52□□□□□ -0.89
PdfS4R2K0 Gm15806-201ENSMUST00000120696 955 ntBASIC9.52□□□□□ -0.89
PdfS4R2K0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Mir7654-201ENSMUST00000185082 70 ntBASIC9.52□□□□□ -0.89
PdfS4R2K0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.52□□□□□ -0.89
PdfS4R2K0 Gm45384-201ENSMUST00000210451 277 ntBASIC9.52□□□□□ -0.89
PdfS4R2K0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC9.52□□□□□ -0.89
PdfS4R2K0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.52□□□□□ -0.89
PdfS4R2K0 Gm17794-201ENSMUST00000220252 955 ntBASIC9.52□□□□□ -0.89
PdfS4R2K0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
PdfS4R2K0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PdfS4R2K0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.51□□□□□ -0.89
PdfS4R2K0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Gm12341-201ENSMUST00000119724 503 ntBASIC9.51□□□□□ -0.89
PdfS4R2K0 Gm23984-201ENSMUST00000157139 203 ntBASIC9.51□□□□□ -0.89
PdfS4R2K0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.51□□□□□ -0.89
PdfS4R2K0 Gm38144-201ENSMUST00000192790 465 ntBASIC9.51□□□□□ -0.89
PdfS4R2K0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.51□□□□□ -0.89
PdfS4R2K0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Gm7653-201ENSMUST00000214567 508 ntBASIC9.51□□□□□ -0.89
PdfS4R2K0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.51□□□□□ -0.89
PdfS4R2K0 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PdfS4R2K0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms