Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Gm12957-201ENSMUST00000117835 377 ntBASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Gm8062-201ENSMUST00000139696 444 ntBASIC11.58□□□□□ -0.56
Cldn6Q9Z262 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 AY702102-202ENSMUST00000194651 1173 ntBASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Gm8227-201ENSMUST00000223306 571 ntBASIC11.58□□□□□ -0.56
Cldn6Q9Z262 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldn6Q9Z262 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Mospd4-201ENSMUST00000180618 576 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gm9823-201ENSMUST00000051212 327 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.57□□□□□ -0.56
Cldn6Q9Z262 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn6Q9Z262 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms