Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm22133-201ENSMUST00000102082 109 ntBASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm13045-201ENSMUST00000119019 712 ntBASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm8343-201ENSMUST00000182705 994 ntBASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm19208-201ENSMUST00000213861 912 ntBASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Gm15711-201ENSMUST00000118889 535 ntBASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Gm8956-201ENSMUST00000203939 825 ntBASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn8aQ9WTU3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Gm9797-202ENSMUST00000218003 294 ntBASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms