Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Gm18363-201ENSMUST00000221671 730 ntBASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Prpf40aQ9R1C7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Daam2-202ENSMUST00000224595 1926 ntBASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Gm10434-201ENSMUST00000101158 471 ntBASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Gm27572-201ENSMUST00000183702 255 ntBASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Prpf40aQ9R1C7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Matn2-203ENSMUST00000226766 3252 ntBASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Gm9630-201ENSMUST00000178304 885 ntBASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Gm18054-201ENSMUST00000207539 555 ntBASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Gm6013-201ENSMUST00000212264 699 ntBASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 CT009754.4-201ENSMUST00000221430 565 ntBASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prpf40aQ9R1C7 Gm22058-201ENSMUST00000083393 310 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms