Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn11aQ9R053 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Gm24844-201ENSMUST00000158679 127 ntBASIC14.43□□□□□ -0.1
Scn11aQ9R053 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.43□□□□□ -0.1
Scn11aQ9R053 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Gm45113-201ENSMUST00000207518 165 ntBASIC14.43□□□□□ -0.1
Scn11aQ9R053 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC14.43□□□□□ -0.1
Scn11aQ9R053 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Snora73b-201ENSMUST00000083419 205 ntBASIC14.43□□□□□ -0.1
Scn11aQ9R053 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.43□□□□□ -0.1
Scn11aQ9R053 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn11aQ9R053 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Mir671-201ENSMUST00000102432 98 ntBASIC14.42□□□□□ -0.1
Scn11aQ9R053 Gm15566-201ENSMUST00000121130 590 ntBASIC14.42□□□□□ -0.1
Scn11aQ9R053 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Mir6923-201ENSMUST00000184592 72 ntBASIC14.42□□□□□ -0.1
Scn11aQ9R053 Gm2517-201ENSMUST00000215651 348 ntBASIC14.42□□□□□ -0.1
Scn11aQ9R053 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.42□□□□□ -0.1
Scn11aQ9R053 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.42□□□□□ -0.1
Scn11aQ9R053 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Gm23045-201ENSMUST00000175041 96 ntBASIC14.42□□□□□ -0.1
Scn11aQ9R053 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Gm43520-201ENSMUST00000197996 164 ntBASIC14.42□□□□□ -0.1
Scn11aQ9R053 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.42□□□□□ -0.1
Scn11aQ9R053 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn11aQ9R053 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.41□□□□□ -0.1
Scn11aQ9R053 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.41□□□□□ -0.1
Scn11aQ9R053 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Scn11aQ9R053 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms