Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
AmfrQ9R049 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AmfrQ9R049 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.85□□□□□ -0.19
AmfrQ9R049 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AmfrQ9R049 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AmfrQ9R049 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AmfrQ9R049 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.85□□□□□ -0.19
AmfrQ9R049 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AmfrQ9R049 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AmfrQ9R049 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AmfrQ9R049 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.85□□□□□ -0.19
AmfrQ9R049 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
AmfrQ9R049 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AmfrQ9R049 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
AmfrQ9R049 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.84□□□□□ -0.19
AmfrQ9R049 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
AmfrQ9R049 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
AmfrQ9R049 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
AmfrQ9R049 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
AmfrQ9R049 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.84□□□□□ -0.19
AmfrQ9R049 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
AmfrQ9R049 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Gm16296-201ENSMUST00000159905 325 ntBASIC13.84□□□□□ -0.19
AmfrQ9R049 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.84□□□□□ -0.19
AmfrQ9R049 Gm18935-201ENSMUST00000212692 664 ntBASIC13.84□□□□□ -0.19
AmfrQ9R049 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
AmfrQ9R049 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AmfrQ9R049 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.83□□□□□ -0.19
AmfrQ9R049 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AmfrQ9R049 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
AmfrQ9R049 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
AmfrQ9R049 Cog3-203ENSMUST00000227473 4197 ntBASIC13.83□□□□□ -0.19
AmfrQ9R049 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.83□□□□□ -0.19
AmfrQ9R049 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
AmfrQ9R049 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.19
AmfrQ9R049 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
AmfrQ9R049 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Gm6023-201ENSMUST00000118217 606 ntBASIC13.83□□□□□ -0.2
AmfrQ9R049 Gm12502-201ENSMUST00000120197 444 ntBASIC13.83□□□□□ -0.2
AmfrQ9R049 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AmfrQ9R049 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
AmfrQ9R049 Gm27516-201ENSMUST00000184237 98 ntBASIC13.83□□□□□ -0.2
AmfrQ9R049 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.83□□□□□ -0.2
AmfrQ9R049 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.83□□□□□ -0.2
AmfrQ9R049 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.83□□□□□ -0.2
AmfrQ9R049 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.83□□□□□ -0.2
AmfrQ9R049 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AmfrQ9R049 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.83□□□□□ -0.2
AmfrQ9R049 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.83□□□□□ -0.2
AmfrQ9R049 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AmfrQ9R049 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
AmfrQ9R049 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
AmfrQ9R049 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
AmfrQ9R049 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AmfrQ9R049 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms