Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Gm7584-201ENSMUST00000175829 940 ntBASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Gm18711-201ENSMUST00000199341 750 ntBASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk3aQ9JKX8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm13350-201ENSMUST00000120519 479 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm6963-201ENSMUST00000147879 379 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm20482-202ENSMUST00000174729 825 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm27046-201ENSMUST00000182160 463 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm42599-201ENSMUST00000201308 469 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Upk3aQ9JKX8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.87□□□□□ -0.51
Upk3aQ9JKX8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms