Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Gm15487-201ENSMUST00000122373 465 ntBASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Mir7023-201ENSMUST00000185093 64 ntBASIC11.88□□□□□ -0.51
Ube4bQ9ES00 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Gm17330-201ENSMUST00000221047 165 ntBASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gm12151-201ENSMUST00000121374 290 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gm14719-201ENSMUST00000121891 340 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gm24694-201ENSMUST00000180054 110 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gm27663-201ENSMUST00000184839 110 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gm29667-201ENSMUST00000190817 490 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ube4bQ9ES00 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ube4bQ9ES00 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms