Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim54Q9ERP3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim54Q9ERP3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim54Q9ERP3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim54Q9ERP3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim54Q9ERP3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Gm17040-202ENSMUST00000170597 889 ntBASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Gm20426-201ENSMUST00000173657 440 ntBASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim54Q9ERP3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Gm27627-201ENSMUST00000183644 150 ntBASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Gm9230-201ENSMUST00000188228 532 ntBASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Gm9996-201ENSMUST00000070359 913 ntBASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trim54Q9ERP3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim54Q9ERP3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms