Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Llcfc1Q9D9P8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.02□□□□□ -0.32
Llcfc1Q9D9P8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Gm27682-201ENSMUST00000183930 110 ntBASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Gm9794-201ENSMUST00000202370 423 ntBASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Gm5035-201ENSMUST00000215581 927 ntBASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Gm45925-201ENSMUST00000218882 744 ntBASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Llcfc1Q9D9P8 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Gm12502-201ENSMUST00000120197 444 ntBASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Gm18584-201ENSMUST00000203098 964 ntBASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Gm44958-201ENSMUST00000203734 736 ntBASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Gm22058-201ENSMUST00000083393 310 ntBASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Llcfc1Q9D9P8 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Gm16177-201ENSMUST00000120728 718 ntBASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Gm44405-201ENSMUST00000198952 126 ntBASIC13□□□□□ -0.33
Llcfc1Q9D9P8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms