Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Gm8712-201ENSMUST00000221090 701 ntBASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Tmem54Q9D7S1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm14381-201ENSMUST00000122105 414 ntBASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm44882-201ENSMUST00000205702 802 ntBASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem54Q9D7S1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Gm24934-201ENSMUST00000103764 111 ntBASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Gm22323-201ENSMUST00000103832 109 ntBASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Gm11930-201ENSMUST00000117788 190 ntBASIC10.83□□□□□ -0.68
Tmem54Q9D7S1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms