Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc7Q9D541 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Gm4984-201ENSMUST00000115987 360 ntBASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Gm14999-201ENSMUST00000121039 624 ntBASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Gm13570-201ENSMUST00000140763 309 ntBASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.43□□□□□ -0.1
Ccdc7Q9D541 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc7Q9D541 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Gm13226-201ENSMUST00000117838 404 ntBASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Gm12036-201ENSMUST00000120008 530 ntBASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Gm8602-201ENSMUST00000184045 607 ntBASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Gm27731-201ENSMUST00000185192 107 ntBASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc7Q9D541 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc7Q9D541 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms