Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.43□□□□□ -0.42
Trim42Q9D2H5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Itm2b-204ENSMUST00000228637 783 ntBASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Mir339-201ENSMUST00000083659 96 ntBASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Btrc-209ENSMUST00000224478 2194 ntBASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.42□□□□□ -0.42
Trim42Q9D2H5 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim42Q9D2H5 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Gm10576-201ENSMUST00000191927 825 ntBASIC12.41□□□□□ -0.42
Trim42Q9D2H5 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC12.41□□□□□ -0.42
Trim42Q9D2H5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms