Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Gm9908-201ENSMUST00000211534 448 ntBASIC11.7□□□□□ -0.54
Upk1aQ9D132 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.7□□□□□ -0.54
Upk1aQ9D132 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1aQ9D132 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.69□□□□□ -0.54
Upk1aQ9D132 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.69□□□□□ -0.54
Upk1aQ9D132 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.69□□□□□ -0.54
Upk1aQ9D132 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Gm8515-201ENSMUST00000194852 576 ntBASIC11.69□□□□□ -0.54
Upk1aQ9D132 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.69□□□□□ -0.54
Upk1aQ9D132 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1aQ9D132 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.68□□□□□ -0.54
Upk1aQ9D132 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.68□□□□□ -0.54
Upk1aQ9D132 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.68□□□□□ -0.54
Upk1aQ9D132 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Gm11597-201ENSMUST00000121423 964 ntBASIC11.68□□□□□ -0.54
Upk1aQ9D132 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Gm37497-201ENSMUST00000195830 798 ntBASIC11.68□□□□□ -0.54
Upk1aQ9D132 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.68□□□□□ -0.54
Upk1aQ9D132 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.68□□□□□ -0.54
Upk1aQ9D132 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Gm10012-201ENSMUST00000078252 192 ntBASIC11.68□□□□□ -0.54
Upk1aQ9D132 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Upk1aQ9D132 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms